Material
Selection tool for imaging usecases
Are you trying to figure out which image analysis use case are possible with your dataset? Or are you trying to optimise your image acquisition settings for your use case? Try this tool to find the right setting and use cases.Marine Imaging Reports:
- MIW17 discussion session outcomes
- MIW14 discussion session outcomes
- MIW14 report on Perspectives in Visual Imaging for Marine Biology and Ecology
iFDO: image FAIR Digital Objects
See https://www.marine-imaging.com/fairStandard operating procedures
Developed by the MareHub working group on Images and the HMC project FDO-5DI:
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SOP iFDO Creation
Main document: https://doi.org/10.5281/zenodo.5681428
Supplement: https://doi.org/10.5281/zenodo.5683081
OceanBestPractices Bundle: http://hdl.handle.net/11329/1782
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SOP Image curation and publication
Main document: https://doi.org/10.5281/zenodo.5704845
Supplement: https://doi.org/10.5281/zenodo.5704843
OceanBestPractices Bundle: http://hdl.handle.net/11329/1781
Marine Sampling Field Manuals for Monitoring Australia’s Marine Waters developed by the Marine Biodiversity Hub:
- https://survey-design-field-manual.github.io/
- https://auv-field-manual.github.io/
- https://benthic-bruvs-field-manual.github.io/
- https://pelagic-bruvs-field-manual.github.io/
- https://towed-imagery-field-manual.github.io/
- https://rov-field-manual.github.io/
Software:
- https://github.com/hohonuuli/vars - MBARI's Video Annotation and Reference System (VARS)
- https://www.biigle.de - A web service for the efficient and rapid annotation of still images and videos.
- https://smartar-id.app/ - A taxonomy-focussed species catalogue and metadata framework
